PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g376410.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HD-ZIP

Protein Properties

Length: 126aa MW: 14641 Da PI: 9.9561

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g376410.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	38.5	2e-12	6	35	27	56
HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 27 aeereeLAkklgLterqVkvWFqNrRakek 56 +++++ LA++l+L rqV vWFqNrRa+ k Pd.00g376410.m01 6 EKQKQALARQLNLRPRQVEVWFQNRRARTK 35 6899************************98 PP
2	HD-ZIP_I/II	91.9	7.5e-30	6	70	26	91
HD-ZIP_I/II 26 perKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ++K++lar+L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+ke +eL+ +l Pd.00g376410.m01 6 EKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQELK-AL 70 589***********************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 126 aa Download sequence
MWRDREKQKQ ALARQLNLRP RQVEVWFQNR RARTKLKQTE VDCEFLKKCC ETLTDENRRL 60 QKELQELKAL KLSQPLYMHM PAATLTMCPS CERIGGVGSE GASKSPFSMA PKPHFYNHFT 120 NPSAAC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	30	38	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	6e-59	HD-ZIP family protein