PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g376450.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 379aa MW: 42156.9 Da PI: 7.1233

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g376450.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.6	2.2e-16	16	64	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd l+ +++++G+g +W + ++++g++R++k+c++rw++yl Pd.00g376450.m01 16 KGPWSPEEDATLKAYIEKHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 64 79*********************************************97 PP
2	Myb_DNA-binding	37.4	6e-12	71	113	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ Pd.00g376450.m01 71 GGFSEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 113 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MADIVAPCCD KANVKKGPWS PEEDATLKAY IEKHGTGGNW IALPQKIGLK RCGKSCRLRW 60 LNYLRPNIKH GGFSEEEDNI ICSLYISIGS RWSIIAAQLP GRTDNDIKNY WNTRLKKKLL 120 GKQRKQQQAQ QSRRAASSLK PEMIKRSESA ANFANLPVGF VNQNPYWAPE LPVAVPMVNY 180 QTHEPQLIKD QASIKNMLIK LGGRFSADNT TSTTTNTNFL YPVDISSSSS SDHQFYQNSI 240 DVLTCTSAPN NNIYAADQFA STHYDANNNG GGSSSPTMFH GLDDHNNNLQ ADHHLSELVV 300 YGNDFPHQHQ QLDGFYQAAE TLNNGSTGTS TTSAESEISW GDINSLVYST QMVSDYETCQ 360 QRMPTVHSVF AESTYFGLK

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MADIVAPCCD KANVKKGPWS PEEDATLKAY IEKHGTGGNW IALPQKIGLK RCGKSCRLRW  60
LNYLRPNIKH GGFSEEEDNI ICSLYISIGS RWSIIAAQLP GRTDNDIKNY WNTRLKKKLL  120
GKQRKQQQAQ QSRRAASSLK PEMIKRSESA ANFANLPVGF VNQNPYWAPE LPVAVPMVNY  180
QTHEPQLIKD QASIKNMLIK LGGRFSADNT TSTTTNTNFL YPVDISSSSS SDHQFYQNSI  240
DVLTCTSAPN NNIYAADQFA STHYDANNNG GGSSSPTMFH GLDDHNNNLQ ADHHLSELVV  300
YGNDFPHQHQ QLDGFYQAAE TLNNGSTGTS TTSAESEISW GDINSLVYST QMVSDYETCQ  360
QRMPTVHSVF AESTYFGLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	2e-73	MYB family protein