PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g376750.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 375aa MW: 40793.9 Da PI: 10.118

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g376750.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	93.5	3.5e-29	224	361	6	128
NAM 6 rFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgy 82 +F+P+d el+ e+L++k+ + + ++e+i+++d iy+ +P +Lp k++ ++ +fF+k+ ++yatg+rk+r+ +++ + Pd.00g376750.m01 224 HFDPSDAELL-EHLAAKCGVGNrkphMFIDEFIPTLDgdngIYYDHPANLP-GSKNDGSSFHFFHKTINAYATGHRKRRKvdchrslaAEHVR 314 6*******.899999766554565444456777766677******.556778899**************86888888877999 PP NAM 83 WkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 W++tgk+k++++ +g ++g+kk++v+y +++ +k+ k++Wvmh+y+l Pd.00g376750.m01 315 WHKTGKTKPIME-NGVQKGCKKIMVLYksSKKGSKADKSNWVMHQYHL 361 ********.999*******4334667888*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MAQNPAIFQS LPDMAQQGYK VGLAPQAVQK KNHQISERKT GGGSNNADDG LKAASGKSSS 60 SIGQRQTLVF DNSARTLNFM SSPVTGSWPP RSIALTTTAT NAPVDSKTSS NSQQQHMFQF 120 QLQKPHMLQQ QQPAIAAKFP KNSACFVSNA VADSAIALNN SLSGKLPAEI GNLSNLQIFN 180 IASNHLSGEI SSELPPRLKY LNLSSNSFSG EIPKSIVNLT GLQHFDPSDA ELLEHLAAKC 240 GVGNRKPHMF IDEFIPTLDG DNGIYYDHPA NLPGSKNDGS SFHFFHKTIN AYATGHRKRR 300 KVDCHRSLAA EHVRWHKTGK TKPIMENGVQ KGCKKIMVLY KSSKKGSKAD KSNWVMHQYH 360 LGTEDGKKEG ESGSA

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MAQNPAIFQS LPDMAQQGYK VGLAPQAVQK KNHQISERKT GGGSNNADDG LKAASGKSSS  60
SIGQRQTLVF DNSARTLNFM SSPVTGSWPP RSIALTTTAT NAPVDSKTSS NSQQQHMFQF  120
QLQKPHMLQQ QQPAIAAKFP KNSACFVSNA VADSAIALNN SLSGKLPAEI GNLSNLQIFN  180
IASNHLSGEI SSELPPRLKY LNLSSNSFSG EIPKSIVNLT GLQHFDPSDA ELLEHLAAKC  240
GVGNRKPHMF IDEFIPTLDG DNGIYYDHPA NLPGSKNDGS SFHFFHKTIN AYATGHRKRR  300
KVDCHRSLAA EHVRWHKTGK TKPIMENGVQ KGCKKIMVLY KSSKKGSKAD KSNWVMHQYH  360
LGTEDGKKEG ESGSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14490.1	1e-53	NAC family protein