PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g377740.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

C2H2

Protein Properties

Length: 322aa MW: 34854.9 Da PI: 8.5993

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g377740.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.8	0.00075	111	133	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H Pd.00g377740.m01 111 YECKTCNRTFPSFQALGGHRASH 133 99**********99999998887 PP
2	zf-C2H2	13.2	0.00027	202	224	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H Pd.00g377740.m01 202 HECSICGAEFTSGQALGGHMRRH 224 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MGCKEQQHNN IIIKGKRTKR LRPQSPIPFA IPTSSSSPED GGGGDGGGEN DYINSATNLS 60 PTTSAEFQDS TTEEEEDMAN CLILFLEATT AVGPTGAKAG AVAAGGGYYA YECKTCNRTF 120 PSFQALGGHR ASHKRPKANT GDDQKNKHFA IGLLPSDEED TQLFKNSILH NNNNNTSSSP 180 LSLHLSNRGL VLSSNKSSSK VHECSICGAE FTSGQALGGH MRRHRAPAAA NTTLALTAPS 240 VPAFEPQQHQ NQHQQPIKKQ RSMLSLDLDL NLPAPEDDHH KESKFVKVKN TNSGGLSLLK 300 ERLRIFSDFF TPKLMSKRSN LM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04390.1	1e-36	C2H2 family protein