PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g379980.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 78aa    MW: 9555.03 Da    PI: 9.8205
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g379980.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.82.8e-09244847
                      HHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
   Myb_DNA-binding  8 EdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47
                      E++ l  +v+++G g+Wk I +      + Rt+ ++k++w++ 
  Pd.00g379980.m01  2 EEDTLRTGVQKYGAGNWKFILNSYReifEERTEVDLKDKWRNM 44
                      8999*************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 78 aa     Download sequence    
LEEDTLRTGV QKYGAGNWKF ILNSYREIFE ERTEVDLKDK WRNMTRQRKQ GQLQSFEMRK  60
NELYKSMYFL LMLVQAIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15720.17e-11MYB_related family protein