PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g380080.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 1004aa MW: 110412 Da PI: 7.563

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g380080.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.8	1.9e-18	437	537	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ ++++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ + Pd.00g380080.m01 437 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGLPIKIQDVKGNEWMFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRID-PG 527 99************************555556667***********99899999999.*******************887.77 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 ++lv++++++ Pd.00g380080.m01 528 GRLVMGFRKA 537 7788877765 PP

Sequence ? help Back to Top
Protein Sequence Length: 1004 aa Download sequence
MVPKVTSVCR FRLNSSLYVS GPTVVFKIWV LQIWTKKGVE FGIMGSKICM NVLCGTTNTH 60 EWKKGWPLRS GGFAHLCFKC GAAYEKLVYC DKFHAGESGW RDCSLCRKPL HCGCIVSKSL 120 YECLDYGGVG CISCAKSSQP CVIQNDDVLN GFGGLKISNY SDRQSTVVQN GAFSNTVDEG 180 KLLQLCKIME ANESNLLPQP QRGDINVSLV QKKQEEVINH KGEVGLGFSS TTQPSIGSLT 240 FSKSDNGRTM IEDMNKSSSQ PSLSMTLGSP SATPSFVQPF PGGLVDGREQ SKTPSSFQQG 300 HGREQGTTPS FQQGLVDGRE QSKTSSSFQQ GLVDGREQSK TPSSFQQGLV DGREQSKTPS 360 SFQQGQKSRP ILPKPLKPGV TMSSETNKGG FPNVRVARPP AEGRGKNQLL PRYWPRITDQ 420 ELQKLSGDLN STIVPLFEKV LSASDAGRIG RLVLPKACAE AYFPPISQSE GLPIKIQDVK 480 GNEWMFQFRF WPNNNSRMYV LEGVTPCIQS MQLQAGDTVT FSRIDPGGRL VMGFRKASKS 540 LDMQDPQTSI LPNSSTPGET SCPSVVENPA TGSGHPGLFQ TNTGSKDPHL HALSEHLLLT 600 DGDMSLHRND YHGHRTSEDL LQQPVSNSDK KRARNIGPKS KRLLMHSEDV LELRLTWEEA 660 QDLLRPPQSV KPSIVTIEDH EFEEYDEPPV FGKRSLFIAS SSERQEQWAQ CDDCSKWRRL 720 PADVLLPPKW TCSENSWDTS RRLCSAPEEM SQKDFDSLLR ASKDLKKRRI IENCTETQGH 780 EPSGLDALAS AAILGDNVVD SGEQSVGATT RHPRHRPGCT CIVCIQPPSG KGKHKPTCTC 840 NVCLTVRRRF KTLMMRKKKR QSEREAENAQ KDNNNHKDES EINGTTTEVG LHMNHSSENG 900 GCQSRIEADV AESSTAGQID LNCEPNPYVQ ASGLTLSRLA DAVSQPLNNY MKESCLANMM 960 CEQQAGIGSS LLTQATDESE RRLSNEGCLS AVAAWDCEGR GDAD

Sequence ? help Back to Top

Protein Sequence Length: 1004 aa Download sequence

MVPKVTSVCR FRLNSSLYVS GPTVVFKIWV LQIWTKKGVE FGIMGSKICM NVLCGTTNTH  60
EWKKGWPLRS GGFAHLCFKC GAAYEKLVYC DKFHAGESGW RDCSLCRKPL HCGCIVSKSL  120
YECLDYGGVG CISCAKSSQP CVIQNDDVLN GFGGLKISNY SDRQSTVVQN GAFSNTVDEG  180
KLLQLCKIME ANESNLLPQP QRGDINVSLV QKKQEEVINH KGEVGLGFSS TTQPSIGSLT  240
FSKSDNGRTM IEDMNKSSSQ PSLSMTLGSP SATPSFVQPF PGGLVDGREQ SKTPSSFQQG  300
HGREQGTTPS FQQGLVDGRE QSKTSSSFQQ GLVDGREQSK TPSSFQQGLV DGREQSKTPS  360
SFQQGQKSRP ILPKPLKPGV TMSSETNKGG FPNVRVARPP AEGRGKNQLL PRYWPRITDQ  420
ELQKLSGDLN STIVPLFEKV LSASDAGRIG RLVLPKACAE AYFPPISQSE GLPIKIQDVK  480
GNEWMFQFRF WPNNNSRMYV LEGVTPCIQS MQLQAGDTVT FSRIDPGGRL VMGFRKASKS  540
LDMQDPQTSI LPNSSTPGET SCPSVVENPA TGSGHPGLFQ TNTGSKDPHL HALSEHLLLT  600
DGDMSLHRND YHGHRTSEDL LQQPVSNSDK KRARNIGPKS KRLLMHSEDV LELRLTWEEA  660
QDLLRPPQSV KPSIVTIEDH EFEEYDEPPV FGKRSLFIAS SSERQEQWAQ CDDCSKWRRL  720
PADVLLPPKW TCSENSWDTS RRLCSAPEEM SQKDFDSLLR ASKDLKKRRI IENCTETQGH  780
EPSGLDALAS AAILGDNVVD SGEQSVGATT RHPRHRPGCT CIVCIQPPSG KGKHKPTCTC  840
NVCLTVRRRF KTLMMRKKKR QSEREAENAQ KDNNNHKDES EINGTTTEVG LHMNHSSENG  900
GCQSRIEADV AESSTAGQID LNCEPNPYVQ ASGLTLSRLA DAVSQPLNNY MKESCLANMM  960
CEQQAGIGSS LLTQATDESE RRLSNEGCLS AVAAWDCEGR GDAD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	847	858	RRRFKTLMMRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein