PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g380620.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 275aa    MW: 32750.2 Da    PI: 9.4423
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g380620.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix79.54.8e-2532114186
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                       +W+ qe+++L+ +r e+++++ ++k++k lWe ++ km+e+g +rs++qCk+kw+nl +ryk ++++e +     ++++p++++l+
  Pd.00g380620.m01  32 QWSIQETKELLVIRAELDQTFMETKRNKLLWEVIATKMKEKGHHRSAEQCKCKWKNLVTRYKGCETMEPEA---MRQQFPFYNELQ 114
                       7********************************************************************95...56689*****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MTTRKRSGNK WDHQPLPSTI SVNVDASDRF PQWSIQETKE LLVIRAELDQ TFMETKRNKL  60
LWEVIATKMK EKGHHRSAEQ CKCKWKNLVT RYKGCETMEP EAMRQQFPFY NELQAIFAAR  120
MQRMLWAEES GAASGSKKKA LSSDEEEDNE DSEAENKAST VRKKKKKVKM SNIGIGSTSG  180
SGSGNNVREI LEEFMKQQMQ MEMQWREEFQ ARENERRLKE MEWRQTMEAL ENERIMMERR  240
WREREEQRRM REEARAEKRD ALITALLNQL RREDM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01380.18e-55Trihelix family protein