PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g385410.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 254aa    MW: 29597.3 Da    PI: 9.3515
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g385410.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.86e-192370148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd ll+++vk++G g+W+++ar  g++R +k+c++rw +yl
  Pd.00g385410.m01 23 KGPWTAEEDGLLIEYVKLHGEGRWNSVARLAGLKRNGKSCRLRWVNYL 70
                      79********************************************97 PP
2Myb_DNA-binding51.91.8e-1676120147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg  T+ E+ +++++++++G++ W+tIar ++ gRt++++k++w+++
  Pd.00g385410.m01  76 RGQITPHEESIILELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 120
                       7888******************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MYLGMMAGHH MGWGIIEEEG WRKGPWTAEE DGLLIEYVKL HGEGRWNSVA RLAGLKRNGK  60
SCRLRWVNYL RPELKRGQIT PHEESIILEL HARWGNRWST IARSLPGRTD NEIKNYWRTH  120
FKKKAKVPSD TSEKAKNRFL RKKQFHNQQH QQQQQHLQVN QEEVKRILAL LDENNDIKMP  180
CFWPQVKQGM ETISTYPHHT TDHQEQGFNY SMLNGNVSVP EASNNEDNFL WDGLWNLNDV  240
HGNFSSTCAA GKAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24310.19e-87MYB family protein