PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g385430.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 236aa MW: 27117.5 Da PI: 8.638

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g385430.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.5	1.8e-19	23	70	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll+++v+++G g+W+++ar g++R +k+c++rw +yl Pd.00g385430.m01 23 KGPWTAEEDRLLIEYVRLHGEGRWNSVARLAGLKRNGKSCRLRWVNYL 70 79********************************************97 PP
2	Myb_DNA-binding	50.6	4.6e-16	76	120	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E+ +++++++++G++ W+tIar ++ gRt++++k++w+++ Pd.00g385430.m01 76 RGQITPNEESIILELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 120 7888****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MYFGVMAGHQ MGWGIIEEEG WRKGPWTAEE DRLLIEYVRL HGEGRWNSVA RLAGLKRNGK 60 SCRLRWVNYL RPDLKRGQIT PNEESIILEL HARWGNRWST IARSLPGRTD NEIKNYWRTH 120 FKKKAKVPSD ASEKAKSQVK RIMALLDESE NNKISSWPQL KQDMETSSAA YPQYTADHQE 180 QGFFYSMLNG NVYVPEASSN EDSVLWDGLW NLDDVHGNFG TAAGKASFHN LVVPFC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24310.1	4e-92	MYB family protein