PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g391200.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 279aa    MW: 31873.8 Da    PI: 7.5311
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g391200.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.20.00057119135117
                       EEETTTTEEESSHHHHH CS
           zf-C2H2   1 ykCpdCgksFsrksnLk 17 
                       ++C+ C k+F+r  nL+
  Pd.00g391200.m01 119 FSCHVCFKTFNRYNNLQ 135
                       89**********99997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MEPSEFSSSS SPFFSANDHV ETLNLFPNYE TPNAHLEPLP SCLLRSPEHQ VPNSHDQNPK  60
ACNEDHKEDE VTVALHIGLP EYSDGSVNYL NEKEDENNVT AQKYWIPTPE QILIGFTHFS  120
CHVCFKTFNR YNNLQYRRGP ESLKGTQPRA MLSIPCYCCA EGCKNNIDHP RAKPLKDFRT  180
LQTHYKRKHG MKPFMCRKCG KLLAVKGDWR THEKNCGKRW LCICGSDFKH KRSLKDHIKA  240
FGHGHRPFPP NSFDEVGDLD EDTSTTPSLF KGMSSDTTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34790.11e-105C2H2 family protein