PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g391380.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 222aa    MW: 24819 Da    PI: 9.6881
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g391380.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.78.9e-18112199185
                       EEEE-..-HHHHT.T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE....EEE-TTHHHHHHHHT--TT-EEEEEE- CS
                B3   1 ffkvltpsdvlks.grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr....yvltkGWkeFvkangLkegDfvvFkld 85 
                       f++++++s+   + + +++p +fa+++g++ ++   ++l+d+sgrsW + ++ + ++ r    +  +kGW +F +an+Lk gD+++F l+
  Pd.00g391380.m01 112 FCTTMSKSHGDPLhAYMTFPAEFARSNGIVATS--RIILKDPSGRSWPLIISKWESKTRgsyrIATRKGWYKFYEANKLKNGDVCIFNLK 199
                       67777777777665789***********99766..6***************8855554445546777********************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MAAVRSSSSS DSWLGNAPCF SSFWFLGSTN DLSVDGVLSF EEGWEVFVNH HGLNIGEMVV  60
FEHKGKMVFN VVAYESLGSE KEYELQSDKH QHDYKGKRTL KGTASSSSRT MFCTTMSKSH  120
GDPLHAYMTF PAEFARSNGI VATSRIILKD PSGRSWPLII SKWESKTRGS YRIATRKGWY  180
KFYEANKLKN GDVCIFNLKP VSSKSGSKST RVLEVQITRD GS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24645.11e-19B3 family protein