PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g392760.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 156aa    MW: 17564.9 Da    PI: 10.4636
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g392760.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.26.1e-1848133385
                       EE-..-HHHHT.T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE....EEE-TTHHHHHHHHT--TT-EEEEEE- CS
                B3   3 kvltpsdvlks.grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr....yvltkGWkeFvkangLkegDfvvFkld 85 
                       +++++s+   + + +++p +fa+++g++ ++   ++l+d+sgrsW + ++ + ++ r    +  +kGW +F +an+Lk gD+++F l+
  Pd.00g392760.m01  48 TTMSKSHGDPLhAYMTFPAEFARSNGIVATS--RIILKDPSGRSWPLIISKWESKTRgsyrIATRKGWYKFYEANKLKNGDVCIFNLK 133
                       556566655554779***********99766..6***************8855554445546777********************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MVFNVVAYES LGSEKEYELQ SDKHQHDYKG KRTLKGTASS SSRTLFSTTM SKSHGDPLHA  60
YMTFPAEFAR SNGIVATSRI ILKDPSGRSW PLIISKWESK TRGSYRIATR KGWYKFYEAN  120
KLKNGDVCIF NLKPVSSKSG SKSTRVLEVQ ITRDGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24645.19e-12B3 family protein