PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g392920.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 89aa    MW: 10185.7 Da    PI: 9.5171
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g392920.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.60.000883350522
                      TTTEEESSHHHHHHHHHH CS
           zf-C2H2  5 dCgksFsrksnLkrHirt 22
                      +Cg  F++k +Lk Hi+ 
  Pd.00g392920.m01 33 ICGSDFKHKRSLKDHIKA 50
                      8***************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
MKPFMCRKCG KLLAVKGDWR THEKNCGKRW LCICGSDFKH KRSLKDHIKA FGHGHRPFPP  60
NSFDEVRDLD EDTSTTPSLF KGMSSDTTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34790.19e-36C2H2 family protein