PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g393310.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 195aa    MW: 21887 Da    PI: 9.1081
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g393310.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH391.4e-12250455
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      +h  +Er+RR+++N+ ++ Lr+l+P++   ++++ + a+i   A++++k+L+
  Pd.00g393310.m01  2 THIVVERNRRKQMNEYLAVLRSLMPQS---YAQRGDQASIIGGAINFVKELE 50
                      899************************...*******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MTHIVVERNR RKQMNEYLAV LRSLMPQSYA QRGDQASIIG GAINFVKELE QLLQSMDSNK  60
RSKQQPLAEF FTFPQFSTRA TQSNNNSAGV QANEPNMAQS NSNKWAAADI EVTMVDSHAN  120
LKILSEKRPR QLLRMVAGFQ SLRLSVLHLN VTTVDEMVLY SVSVKIEEGC LLNTVDEIAA  180
AVNQMLRRIQ EGGFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.11e-77bHLH family protein