PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g394890.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 313aa    MW: 35256.5 Da    PI: 10.4688
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g394890.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B343.55.8e-148743399
                      -SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3 33 sktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                      s  ++++  +gr+W++ l+ ++ + +  +++GW +F+++n+Lk+gD++vF l+++ + ++ v +fr+
  Pd.00g394890.m01  8 SGNVMFRVMDGRTWSLGLKCERAKPKARFQSGWFKFARDNNLKSGDVCVFVLVDDIRLTFEVVIFRA 74
                      3469999999********999999999**************************99888899999986 PP
2B354.81.7e-17192273487
                       E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr 87 
                       v +++++ + g l +  kf++eh ++ +++   +l+ ++gr+W v l   k++++ + +++GW +Fv++n+L+ gD++vF l++ 
  Pd.00g394890.m01 192 VVMHPSYIRAGYLHIGAKFIKEHLLN-RGHENAILRVSDGRTWPVSL--GKQGKGiVRFQTGWMKFVQDNQLEIGDVCVFVLTNA 273
                       567888899999***********666.455689**************..777777799**********************98766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MTHLSNNSGN VMFRVMDGRT WSLGLKCERA KPKARFQSGW FKFARDNNLK SGDVCVFVLV  60
DDIRLTFEVV IFRAIEAANT LSPDVDGGQT MSEMEETDED YDSVELLDYF PPCPKTRKKS  120
PMAPQPSKKN RTCSISTAEN NIKSVGGPSR SQKFLKRRPQ VPRRMNPVTE SGTDRALLRA  180
KAFRPEYPSS TVVMHPSYIR AGYLHIGAKF IKEHLLNRGH ENAILRVSDG RTWPVSLGKQ  240
GKGIVRFQTG WMKFVQDNQL EIGDVCVFVL TNAIKRLIDV VLFRATEAAK CTLSGEGNRR  300
PTISSSRKIK REA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-15B3 family protein