PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g395180.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 301aa    MW: 33716.9 Da    PI: 7.539
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g395180.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.46.9e-181663148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g WT+ Ed++l+ +v+++G g+W + +++ g+ R++k+c++rw++yl
  Pd.00g395180.m01 16 KGLWTPAEDQKLLAYVQKHGHGNWQSLPQKAGLQRCGKSCRLRWRNYL 63
                      678********************************************7 PP
2Myb_DNA-binding47.54.1e-1569112146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg+++ +Ed+ +++++++lG++ W++I ++++ +Rt++++k++w++
  Pd.00g395180.m01  69 RGNFSLQEDQTIIQLHALLGNR-WSAITAHLP-KRTDNEVKNYWHS 112
                       89********************.*********.***********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MGNSTHDCVA SSGVKKGLWT PAEDQKLLAY VQKHGHGNWQ SLPQKAGLQR CGKSCRLRWR  60
NYLRPDIKRG NFSLQEDQTI IQLHALLGNR WSAITAHLPK RTDNEVKNYW HSRLKKRLAL  120
EGYDPVTHKP KNTIFGFANG STDDPKTGSN LNHIAQWESV RLQAEARYVR DSELHKQAYH  180
PYNNNDISTA SSILSSYNED FGQNVPQCLD ICSFGNRLAG DFEPPIISAI SNNGSSLMDC  240
FVHEPVGQCL DENCGTSITE PFATVHHDMG FKNNGACLED FGLWEIIMQG KKDCPISGIS  300
M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01140.14e-83MYB family protein