PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g395190.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 329aa MW: 37061.6 Da PI: 8.9725

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g395190.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.2	1.8e-18	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed++l+ +v+++G g+W + +++ g+ R++k+c++rw++yl Pd.00g395190.m01 15 KGPWTPAEDQKLLAYVQKYGHGNWQSLPQKAGLQRCGKSCRLRWRNYL 62 79*********************************************7 PP
2	Myb_DNA-binding	45.7	1.5e-14	68	111	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++ +Ed +++++++lG++ W++I ++++ +Rt++++k++w++ Pd.00g395190.m01 68 RGNFSLQEDRTIIQLHALLGNR-WSAITAHLP-KRTDNEVKNYWHS 111 89******************.*****.*********86 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MRKSTHSVAS SGMKKGPWTP AEDQKLLAYV QKYGHGNWQS LPQKAGLQRC GKSCRLRWRN 60 YLRPDIRRGN FSLQEDRTII QLHALLGNRW SAITAHLPKR TDNEVKNYWH SRLKKQLALK 120 GYDPVTHKPK TTIFGSANGS TDDRKTGSNL NHIAQWESAR LQAEARFVRD SELHKQAQNL 180 YDNNDISTAS SILLGHNKDF GPTDQLFGQN TPQCLDILRA WESILISNYS KATGGQDHIN 240 SFGNGLAGDF EPPIISAISR SNESSLMDCF FHEPVGQWFD ENYGTSITEP FAAVHHNMGF 300 KNGACLEDFG LWEIIMQGRK DCPISGISM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01140.1	1e-81	MYB family protein