PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g395600.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 440aa MW: 50908.6 Da PI: 6.3794

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g395600.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.1	5.3e-22	104	186	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fYn YAk+ GF vr+s++ ++ +++e ++ ++ Cs g++++++ + r+r+etrtgC a++k ++++ ++w+++++eleHnH ++ Pd.00g395600.m01 104 FYNCYAKQQGFGVRVSNTWYR-KSKERYRGKLSCSSAGFKKKSEAN-----RPRPETRTGCPAMIKFRLMDLNRWRIIEVELEHNHLIS 186 9*************99997.66779**********99888.....*********************************876 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MPIPYISREH EKVSFHFVRH APRSLLSECT CRFSGNSPAT LRSDMDEVSL NTEPAGDDDA 60 DEFEIEGDCA MTDFISQTGI IQGENPLPPV VGMEFDSYED VYYFYNCYAK QQGFGVRVSN 120 TWYRKSKERY RGKLSCSSAG FKKKSEANRP RPETRTGCPA MIKFRLMDLN RWRIIEVELE 180 HNHLISPASG KFYKSHKSVG VGTKRALQLY TAEEVQKIRL FRTVIIDSED KYDQALQTHH 240 RLEALADLDS RNSSYMLKSR CYFELQLSKV YTNDILRKFE SEVEGMYSCF STSQLNPDGP 300 VITYIVKEQT EVDGNRREVR DYEVLYNPSE MEVLCICGMF NLRGYLCRHT LSVLNQNGVE 360 EIPAQYVLSR WRKDIKRNYI FDHSCSGIDI NNPVHRYDHL YKCIVEVVEE GRKSQDRYKV 420 AFGALDEILN KLCLTEDPAL

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MPIPYISREH EKVSFHFVRH APRSLLSECT CRFSGNSPAT LRSDMDEVSL NTEPAGDDDA  60
DEFEIEGDCA MTDFISQTGI IQGENPLPPV VGMEFDSYED VYYFYNCYAK QQGFGVRVSN  120
TWYRKSKERY RGKLSCSSAG FKKKSEANRP RPETRTGCPA MIKFRLMDLN RWRIIEVELE  180
HNHLISPASG KFYKSHKSVG VGTKRALQLY TAEEVQKIRL FRTVIIDSED KYDQALQTHH  240
RLEALADLDS RNSSYMLKSR CYFELQLSKV YTNDILRKFE SEVEGMYSCF STSQLNPDGP  300
VITYIVKEQT EVDGNRREVR DYEVLYNPSE MEVLCICGMF NLRGYLCRHT LSVLNQNGVE  360
EIPAQYVLSR WRKDIKRNYI FDHSCSGIDI NNPVHRYDHL YKCIVEVVEE GRKSQDRYKV  420
AFGALDEILN KLCLTEDPAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	3e-65	FAR1 family protein