PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g398350.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 196aa    MW: 21296.4 Da    PI: 8.3102
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g398350.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.57.7e-1965115155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       + y+GVr++  +g+WvAeIr p   + r  r +lg+f ta eAa a+++a+++++g
  Pd.00g398350.m01  65 CNYRGVRQRT-WGKWVAEIRAP---N-RgSRLWLGTFPTAIEAALAYDEAARAMYG 115
                       56*****999.**********8...3.35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MTKLVKTDPR QDGSNPVAET LAKWKAYNDH LDSCNDESKP IRRVPAKGSK KGCMKGKGGP  60
ENSRCNYRGV RQRTWGKWVA EIRAPNRGSR LWLGTFPTAI EAALAYDEAA RAMYGSAARL  120
NFPNISISSL SKDPSSRATL SAPSLLATSA GSESSGRSDH SEDCAAQGKV NYLSPNVENE  180
DTTTNRDQTN EDGEDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.27e-34ERF family protein