PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g398850.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 500aa MW: 54941.6 Da PI: 4.6002

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g398850.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	35.3	3.5e-11	192	281	43	128
NAM 43 ePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ePwd+ + k ++ +++yfF+k + + +g+r r++ +g Wk + ++v + k++ gl + + + ++++ ++ W+mhey+l Pd.00g398850.m01 192 EPWDIWNdfggqK-LEKGEDLYFFTKLKLVTGKGSRVARMIGNGSWKGEDRGTTVRDPakKNTPLGLCRRFRYE--NDKSDQHGCWIMHEYSL 281 8999964345422.2356789************************999999998875566669999999997..44445699*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 500 aa Download sequence
MADKWKHTAL LVIDMQHDFV DVDGPMPVSG GKAIVPNVIK AVQIARQRGM LVVWVVREHD 60 PLGRDVELFR RHLYPAGKVG PTVKGQFGAE LVDGLVIQEG DYKLVKTRFS AFFATHLDSF 120 LKGAGIDSLV VTGVQTPNCI RQTVFDGVAL DYKSVTVVLD ATAAATPEVH AANILDMKNI 180 GVATPTLQEW KEPWDIWNDF GGQKLEKGED LYFFTKLKLV TGKGSRVARM IGNGSWKGED 240 RGTTVRDPAK KNTPLGLCRR FRYENDKSDQ HGCWIMHEYS LHRSLVKPHS NSNTCGGDAG 300 ADYHYSRTGA NAYLPMSQPH YLLTDYPTTM ASASTTPPPS LPQPDYSFEL ISDTDHQPAQ 360 GFNYDLSQFL DDDDVETLMK DLSNLDNIQP LAAQPLGGGS HPYPSIIQEA AVDEDSGNIN 420 SGFGISSEDQ TGGELGTENV QLNVLGFPVH DNEMLDFLNR ASFDDLVDMI QFDDNDDELQ 480 AFAMSQSVMG MESTTTAATC

Sequence ? help Back to Top

Protein Sequence Length: 500 aa Download sequence

MADKWKHTAL LVIDMQHDFV DVDGPMPVSG GKAIVPNVIK AVQIARQRGM LVVWVVREHD  60
PLGRDVELFR RHLYPAGKVG PTVKGQFGAE LVDGLVIQEG DYKLVKTRFS AFFATHLDSF  120
LKGAGIDSLV VTGVQTPNCI RQTVFDGVAL DYKSVTVVLD ATAAATPEVH AANILDMKNI  180
GVATPTLQEW KEPWDIWNDF GGQKLEKGED LYFFTKLKLV TGKGSRVARM IGNGSWKGED  240
RGTTVRDPAK KNTPLGLCRR FRYENDKSDQ HGCWIMHEYS LHRSLVKPHS NSNTCGGDAG  300
ADYHYSRTGA NAYLPMSQPH YLLTDYPTTM ASASTTPPPS LPQPDYSFEL ISDTDHQPAQ  360
GFNYDLSQFL DDDDVETLMK DLSNLDNIQP LAAQPLGGGS HPYPSIIQEA AVDEDSGNIN  420
SGFGISSEDQ TGGELGTENV QLNVLGFPVH DNEMLDFLNR ASFDDLVDMI QFDDNDDELQ  480
AFAMSQSVMG MESTTTAATC