PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g400120.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CPP

Protein Properties

Length: 782aa MW: 85816.3 Da PI: 6.7512

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g400120.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	47.5	3.5e-15	509	547	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+CnC++skClk+YCeCfaag++C ++C C +C Nk e Pd.00g400120.m02 509 CKRCNCRRSKCLKLYCECFAAGVYCVDSCACVNCYNKPE 547 89**********************************975 PP
2	TCR	52.2	1.2e-16	595	633	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkkskClk+YCeCf+a++ Cs+ C+Ce+CkN+ Pd.00g400120.m02 595 RHKRGCNCKKSKCLKRYCECFQAKVGCSSACRCEGCKNT 633 589***********************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 782 aa Download sequence
MDRTPEANRI AATKSSSISS SPAVQESPFS NFLSNLSPLN TATTASYTQT LLGTNLPTPP 60 VVFTSPHINL QRETSFLERD DIVEAGSEVY KECNTNIVQI QNPSFEEVQL CSPSGCVDEY 120 LAYPVEVDST CSADLRSQRT NEVPRLLHSG FSPGKESNTK VCDIMFGSPE NEAIVLSDQA 180 EKDLPLSSLE MSQAAINQRD GKKTEELSRF IFEKVRESDV NSCLVSRAQN CGENAAKRAG 240 CQYDEKNASS QSREDSNERK QRVQKGLVKE GGQNERGIRR HLQFEAAKAY KFTILGNSES 300 PNSLTHDGTN SRSPSILTNL KSLASSHFDN RASSSLQDVS CDTSQFPSSP YESFTSAQIG 360 VNSTTSAPIH SGIGLHLNRI SRSTSLSSDI FSSKKSTGYL STPEQMLEYG SNNIATNSSS 420 ILTSAVSGKI YVYVASSQQE SQAVTEANSF TFHSTDTMKP PCHSMLVDQE AAPCEVGMSA 480 SQETDEVEEL NQLSPKRKRR RDAYMSEGCK RCNCRRSKCL KLYCECFAAG VYCVDSCACV 540 NCYNKPEFED TVLDIRQQIE ARNPLAFTPK VVDNAIDSSP NFTEEQDLTT PSSARHKRGC 600 NCKKSKCLKR YCECFQAKVG CSSACRCEGC KNTFGVTPEP VYNRAKRWEA HPAEKLDNVK 660 GAIACIKAPA FSSASSSNSA KIPQAQLSSS QLQPSGAHYD IPHDDTPEIL EETSNPTKFV 720 KASSPNQKHV SPPQSRSRLR ERSPTGLRSG RKFILQAMPS FPPLTPHRNS NEGTNEIEND 780 DK

Sequence ? help Back to Top

Protein Sequence Length: 782 aa Download sequence

MDRTPEANRI AATKSSSISS SPAVQESPFS NFLSNLSPLN TATTASYTQT LLGTNLPTPP  60
VVFTSPHINL QRETSFLERD DIVEAGSEVY KECNTNIVQI QNPSFEEVQL CSPSGCVDEY  120
LAYPVEVDST CSADLRSQRT NEVPRLLHSG FSPGKESNTK VCDIMFGSPE NEAIVLSDQA  180
EKDLPLSSLE MSQAAINQRD GKKTEELSRF IFEKVRESDV NSCLVSRAQN CGENAAKRAG  240
CQYDEKNASS QSREDSNERK QRVQKGLVKE GGQNERGIRR HLQFEAAKAY KFTILGNSES  300
PNSLTHDGTN SRSPSILTNL KSLASSHFDN RASSSLQDVS CDTSQFPSSP YESFTSAQIG  360
VNSTTSAPIH SGIGLHLNRI SRSTSLSSDI FSSKKSTGYL STPEQMLEYG SNNIATNSSS  420
ILTSAVSGKI YVYVASSQQE SQAVTEANSF TFHSTDTMKP PCHSMLVDQE AAPCEVGMSA  480
SQETDEVEEL NQLSPKRKRR RDAYMSEGCK RCNCRRSKCL KLYCECFAAG VYCVDSCACV  540
NCYNKPEFED TVLDIRQQIE ARNPLAFTPK VVDNAIDSSP NFTEEQDLTT PSSARHKRGC  600
NCKKSKCLKR YCECFQAKVG CSSACRCEGC KNTFGVTPEP VYNRAKRWEA HPAEKLDNVK  660
GAIACIKAPA FSSASSSNSA KIPQAQLSSS QLQPSGAHYD IPHDDTPEIL EETSNPTKFV  720
KASSPNQKHV SPPQSRSRLR ERSPTGLRSG RKFILQAMPS FPPLTPHRNS NEGTNEIEND  780
DK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	496	501	KRKRRR
2	497	501	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	4e-60	CPP family protein