PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g400610.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 166aa    MW: 18149.1 Da    PI: 4.6099
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g400610.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.96.8e-104312855
               AP2 28 rkrfslgkfgtaeeAakaaiaarkkleg 55
                      ++r++lg+f taeeAa+a+++a+  + g
  Pd.00g400610.m01  4 KRRVWLGTFETAEEAARAYDEAAILMSG 31
                      59********************987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MGRKRRVWLG TFETAEEAAR AYDEAAILMS GRNAKTNFPV LTNEVSNDHN NNNSSSSSSS  60
SALSAILSAK LRKCCKSPSP SLTCLRLDTE NSHIGVWQKG AGPRSDSNWL MMVELDQKSL  120
QPPQPETSTS ALDTEEMAAG QDGGDDSMND EERVALQMIE ELLNRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.13e-40ERF family protein