PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g400770.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 328aa    MW: 36866.6 Da    PI: 9.0739
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g400770.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.13.6e-171562148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT  Ed++l+ +v+++G g+W + +++ g+ R++ +c++rw++yl
  Pd.00g400770.m01 15 KGPWTLAEDQKLLAYVQKHGHGNWQSLPQKAGLQRCGRSCRLRWRNYL 62
                      79*********************************************7 PP
2Myb_DNA-binding51.22.8e-1668111146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg+++ +Ed+ +++++++lG++ W++Ia++++ +Rt++++k++w++
  Pd.00g400770.m01  68 RGNFSLQEDQTIIQLHALLGNR-WSAIAAHLP-KRTDNEVKNYWHS 111
                       89********************.*********.***********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MRKSTHCVAS SGMKKGPWTL AEDQKLLAYV QKHGHGNWQS LPQKAGLQRC GRSCRLRWRN  60
YLRPDIKRGN FSLQEDQTII QLHALLGNRW SAIAAHLPKR TDNEVKNYWH SRLKKLLALK  120
GYDPVTHKPK TTIFGFANGS TDDPKTSSNL NHIAQWESAR LQAEARFVRD LELHKQAHHP  180
YNNNDICAAS TILLGHNKDF GPTDQLFGQN RPQCLDILRA WESILMSNYS KAARGQDHVN  240
SLGNGLAGEF EPSIVSAISS NGSSLMDYFF HEPVGQCFDE NHGTSITEPF SAVHNNMGFK  300
NGACLEDFGL WEIVMRGRKD CPVSGISM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01140.13e-81MYB family protein