PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g401340.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 571aa MW: 66335.1 Da PI: 6.3993

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g401340.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	71.6	1.8e-22	235	317	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fYn YAk+ GF vr+s++ ++ +++e ++ ++ Cs g++++++ + r+r+etrtgC a++k +++++++w+v+++eleHnH ++ Pd.00g401340.m01 235 FYNCYAKQQGFGVRVSNTWYR-KSKERYRGKLSCSSAGFKKKSEAN-----RPRPETRTGCPAMIKFRLMDSNRWRVIEVELEHNHLIS 317 9*************99997.66779**********99888.....*********************************876 PP

Sequence ? help Back to Top
Protein Sequence Length: 571 aa Download sequence
MYSCFSTTQL HIDGPIIIFL VKERVVVEGH RREIRDYEVL YNRTAGEVRC ICSCFNFYGY 60 LCRHALCVLN FNGVEEIPSK YILSRWKKDF KRIYIPDHGS SNADDTDRMQ WFNQLYRSAL 120 QIVEEGVISL DHYNVALQAF EESLNRPLCT SRATFLAERV YLPIFRKLSR DSRSDMDEVS 180 LNTEPAGDDD ADEFEIEGDS AMTDFISQTG IIQGENPLPP VVGMEFDSYE DVYYFYNCYA 240 KQQGFGVRVS NTWYRKSKER YRGKLSCSSA GFKKKSEANR PRPETRTGCP AMIKFRLMDS 300 NRWRVIEVEL EHNHLISPAS GKFYKSHKSV GVGTKRALQL DTAEEVQKIR LFRTVIIDSE 360 DKYDQALQTH HRLEALADLD SRNSSYMLKS RCYFELQLSK VYTNDILRKF ESEVEGMYSC 420 FSTSQLNPDG PVITYIVKEQ TEVDGNRREV RDYEVLYNPS EMEVLCICGM FNLRGYLCRH 480 TLSVLNQNGV EEIPAQYVLS RWRKDIKRNY IFDHSCSGID INNPVHRYDH LYKCIVQVVE 540 EGRKSQDRYK VAFGALDEIL NKLCLTEDPA L

Sequence ? help Back to Top

Protein Sequence Length: 571 aa Download sequence

MYSCFSTTQL HIDGPIIIFL VKERVVVEGH RREIRDYEVL YNRTAGEVRC ICSCFNFYGY  60
LCRHALCVLN FNGVEEIPSK YILSRWKKDF KRIYIPDHGS SNADDTDRMQ WFNQLYRSAL  120
QIVEEGVISL DHYNVALQAF EESLNRPLCT SRATFLAERV YLPIFRKLSR DSRSDMDEVS  180
LNTEPAGDDD ADEFEIEGDS AMTDFISQTG IIQGENPLPP VVGMEFDSYE DVYYFYNCYA  240
KQQGFGVRVS NTWYRKSKER YRGKLSCSSA GFKKKSEANR PRPETRTGCP AMIKFRLMDS  300
NRWRVIEVEL EHNHLISPAS GKFYKSHKSV GVGTKRALQL DTAEEVQKIR LFRTVIIDSE  360
DKYDQALQTH HRLEALADLD SRNSSYMLKS RCYFELQLSK VYTNDILRKF ESEVEGMYSC  420
FSTSQLNPDG PVITYIVKEQ TEVDGNRREV RDYEVLYNPS EMEVLCICGM FNLRGYLCRH  480
TLSVLNQNGV EEIPAQYVLS RWRKDIKRNY IFDHSCSGID INNPVHRYDH LYKCIVQVVE  540
EGRKSQDRYK VAFGALDEIL NKLCLTEDPA L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	2e-71	FAR1 family protein