PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g405430.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 228aa    MW: 24748 Da    PI: 5.9293
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g405430.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.23e-115991238
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgt 38
                      +y+GVr+++ +g+WvAeIr+p++   r+r +lg+f t
  Pd.00g405430.m01 59 RYRGVRQRS-WGKWVAEIREPRK---RTRKWLGTFST 91
                      59****999.**********954...5********88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MEDEHPLSPP AAPPHHPPQD NDNNNKFPDS TTASTATTPT ETNNKKCKGK GGPDNNKFRY  60
RGVRQRSWGK WVAEIREPRK RTRKWLGTFS TPRTPPAPTT GPPSSSTVPG PSSTSSPPYP  120
VSDGGGGDTS TSYQNPNPSH DQYQELLHHN QNNQADSCSF DDGNSIMGSR LSLSSSQPMP  180
VAPGCSDPMS GVGPMSPLMW PLTSEEECAP SLWDYGDPFF LDFKGFDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.15e-24ERF family protein