PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g411230.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 194aa    MW: 22203.9 Da    PI: 6.8818
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g411230.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.31.3e-163779145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                      rg+ ++eE++l+++ +k+lG++ W++Iar+++ gRt++++k++w+
  Pd.00g411230.m01 37 RGNISPEEEDLIIRMHKLLGNR-WSLIARRLP-GRTDNEIKNFWN 79
                      7999******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MEKENGATLL RKLVGLNRSG KSCRLRWLNY IRPDVKRGNI SPEEEDLIIR MHKLLGNRWS  60
LIARRLPGRT DNEIKNFWNI NLSKRVPEAR PHRIKINAKN DGADEGGNCS AKDDQVQVIQ  120
SITLNCTKAA AMIPSHHHLH DGDQRVNIQD QRVVDDISSS SFLRDLDNFI NDVLHESEIN  180
GDQNYVVDDQ EGEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35550.14e-39MYB family protein