PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g411250.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 177aa    MW: 20354 Da    PI: 9.9489
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g411250.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.59.9e-165092145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                      rg+ ++eE++l+++ +k+lG++ W++Ia +++ gRt++++k++w+
  Pd.00g411250.m01 50 RGNISPEEEDLIIRMHKLLGNK-WSLIAGRLP-GRTDNEIKNFWN 92
                      7999******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MTVRLKPQPN GTAPRVKIDS FPWQARQGLN RSGKSCRLRW LNYLRPDVKR GNISPEEEDL  60
IIRMHKLLGN KWSLIAGRLP GRTDNEIKNF WNINLSRRVL EEGRSPNNQR GIKTFNCTKA  120
SPMIPSHDDH DHDQMVENAA DATLPGSVRK DHENSFLRDL DNFINDLLRD SGINGEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.13e-40MYB family protein