PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g412230.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 210aa    MW: 23216.3 Da    PI: 4.4295
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g412230.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.51.4e-1238791255
               AP2 12 rgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                      +++Wv+e+r+p   + k+  ++lg++ tae+Aa+a++ a+++++g
  Pd.00g412230.m01 38 NNKWVCELRHP---NkKKSGIWLGTYPTAEMAARAHDVAALAFKG 79
                      68********9...5467***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MDIIFSQLSD SADQPKSSSS SDASVATLRT SDVILADNNK WVCELRHPNK KKSGIWLGTY  60
PTAEMAARAH DVAALAFKGN LACLNFADSG WRLPVAASMD SMDIQRAAAE AAEGFRPVEF  120
GGVSSDSSDE KERMVVVEEK KKKQAIVYMG KSCSRLNLFY LDEEEMFDMP RLIDNMAEGL  180
LLSPPQCLAG YLNWDDMETE ADPKLWSFSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.12e-40ERF family protein