PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g412320.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 105aa    MW: 11172.7 Da    PI: 10.0715
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g412320.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.52.4e-161058154
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
                      s+y+G+r ++  g+Wv+eIr+p++   ++r++lg++ t+e+Aa+a++ a+++l+
  Pd.00g412320.m01 10 SRYHGIR-CR-GGKWVSEIREPRK---TRRIWLGTYPTPEMAAAAYDVAALALK 58
                      78****9.55.7*********843...5**********************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    
MASSSCGKYS RYHGIRCRGG KWVSEIREPR KTRRIWLGTY PTPEMAAAAY DVAALALKRG  60
DAVLNFPSSI ASYPVPASTS PEDIRSAAAA AAALQRNAVV SAETA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.13e-27ERF family protein