PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g412750.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 237aa    MW: 26247.4 Da    PI: 9.9526
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g412750.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.71.8e-151961145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                      r++WT+eE+  l  +++++G++ W+ Iar ++ gRt++ +k++w+
  Pd.00g412750.m01 19 RNAWTEEEEWVLTYYHQLFGNK-WAEIARFLP-GRTDNAIKNHWN 61
                      789*******************.*********.***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MKLIITFRWY NHLCPAINRN AWTEEEEWVL TYYHQLFGNK WAEIARFLPG RTDNAIKNHW  60
NCTLKRKLDS YSPNGCDVDM HPHVWNEWKP VKVQKCRSSD RGANSLTNLI TSGSSKHSPL  120
SASSSVFVGA SASTRSSPLE SPSCYSTPQS RAQNVNVNLS SGSSPGSRLK NLALSFKNTP  180
SIIRKRSSRR PDASSAAVKS LGRCLEREFD AENNSGVTKC GQLFSAYATS SDVNVGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32730.22e-28MYB family protein