PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g412760.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 149aa MW: 17146.8 Da PI: 8.3691

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g412760.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.5	2.7e-17	58	102	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+eEd+ll ++v+++ + +Wk Ia++++ gRt+ qc rwqk+l Pd.00g412760.m01 58 CWTEEEDDLLGELVRKFNSSNWKEIAACLP-GRTDVQCLQRWQKVL 102 6***************************.**********986 PP
2	Myb_DNA-binding	50.2	6e-16	108	149	1	43
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksr 43 +g+WT+eEd+ +++ v+ +G ++W+ Ia+ ++ gR +kqc++r Pd.00g412760.m01 108 KGPWTKEEDDCIIKQVESHGAKRWSVIAKFLP-GRMGKQCRER 149 79****************************.******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 149 aa Download sequence
MAKVKKEQLQ EVVVDPYEKM GFLLQVLYET EGCFDSPASK PSSATWRATG PMRRSAKCWT 60 EEEDDLLGEL VRKFNSSNWK EIAACLPGRT DVQCLQRWQK VLNPEIVKGP WTKEEDDCII 120 KQVESHGAKR WSVIAKFLPG RMGKQCRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11510.1	5e-42	MYB family protein