PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g415990.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 248aa    MW: 28663.6 Da    PI: 6.312
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g415990.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.82.7e-1528114799
                       .-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3   7 psdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                          ++ ++ l++pk+f++++ +  + s ++ l+ + g +We+kl  r++ g+ +++kGW eF +   Lk g +++F+++g+s+f  +v +f++
  Pd.00g415990.m01  28 ADETSGNKTLRVPKTFLDKCAE--HLSDQIHLKLPCGSEWEIKL--RRCNGEAWFGKGWPEFSEFYSLKKGNSLLFRYEGNSKF--NVLIFDE 114
                       555667789***********74..47789***************..**********************************9999..9999986 PP
2B349.95.6e-161672471398
                       TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                       +  + +p +f ++++    e+ +++      rsW vkli++++ ++  l++GW+ F k+n LkegD+++F+l+++++  l+v +fr
  Pd.00g415990.m01 167 HLGMNIPASFRKHFNTM--EN-QIVRLWVGDRSWPVKLIFQRNNDQ--LSAGWRAFLKENSLKEGDVCIFELIDTNNIALLVNIFR 247
                       44588999997444322..22.355455688*********999998..9************************9999999999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MAAFPHQKVD HQGPKFRATT PHFLNMIADE TSGNKTLRVP KTFLDKCAEH LSDQIHLKLP  60
CGSEWEIKLR RCNGEAWFGK GWPEFSEFYS LKKGNSLLFR YEGNSKFNVL IFDESGTEMD  120
YPITITLIEE TDEEDDVKSV ESLEVNVEAA NEFVSSHPFF KVTLRKHLGM NIPASFRKHF  180
NTMENQIVRL WVGDRSWPVK LIFQRNNDQL SAGWRAFLKE NSLKEGDVCI FELIDTNNIA  240
LLVNIFRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.16e-22B3 family protein