PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g416650.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 169aa MW: 19369.7 Da PI: 9.6115

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g416650.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.6	7.2e-30	91	148	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk+s+fp sYYrCt++gC vkk+v+r ++d+++v++tYeg H h+ Pd.00g416650.m02 91 LDDGYRWRKYGQKTVKNSKFP-SYYRCTHQGCIVKKQVQRLSKDEEIVVTTYEGIHSHP 148 59*****************.9*********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 169 aa Download sequence
MEHNQILFLA LPKSSDSASP NLSSNPSNIS QVFPRFHFDS AGLMKNEAKI YQHCGTSYGS 60 VDKMKSGKKE GGKETKKHKY AFQTRSQVDI LDDGYRWRKY GQKTVKNSKF PSYYRCTHQG 120 CIVKKQVQRL SKDEEIVVTT YEGIHSHPTD ETSAENFDQI LRHLQTYNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	4e-45	WRKY family protein