PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g417730.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 497aa MW: 55245.1 Da PI: 4.5471

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g417730.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	81.4	1.9e-25	63	183	14	128
NAM 14 lvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelv 100 l ++ ++ ++gk ++ ++i+e+d yk+ePw+L +++ w Fs+ d+kya++ r nr t++g+Wk tgk +e++s+ +++++ Pd.00g417730.m01 63 LFLRFSERMMQGKASQARHIIPEIDFYKYEPWELAGlmlpDSPYQTRMWLCFSRPDHKYANSPRCNRLTEKGFWKITGKPREIKSRqlSKSVT 155 55566678899999999999************8434553334778**********************************97666667 PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 k+tL+f+ gr +k++kt Wv +ey+l Pd.00g417730.m01 156 CKKRTLTFHLGRPSKSSKTGWVKQEYSL 183 7789********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MSGSSSTTTE AWVLDLLRGF RYHPPEEEMV NLLKKQVEGQ GSQAMPEIED KPWDLPDNES 60 IQLFLRFSER MMQGKASQAR HIIPEIDFYK YEPWELAGLM LPDSPYQTRM WLCFSRPDHK 120 YANSPRCNRL TEKGFWKITG KPREIKSRQL SKSVTCKKRT LTFHLGRPSK SSKTGWVKQE 180 YSLTSTVPGS NLSGLVLLRM KNKSADYESD NKQQQDVSIY DESADPAIGG DMASNSQDDQ 240 AAANHMILEA EEHLLGSGNH NDGEPGGFDI IQELCAQLGL DSPSPPPEQP RSHQLPQLGN 300 VPGTGDYLAS NSDNEAAAIH HLTTDEEELL AYKELERVLL GSGNPDDGEP GSCVSSDKHQ 360 ELCAQPGEDL DSPVPPPGRP ELGNAPDVYT DKCSIRSSPI RDNDSSLANK NNIPTNHDSK 420 PVSNTASNFE NQTTCERSSE VYCQSEENLQ LFYRSLELED YTFSSPISYL DLGDILHTNN 480 FIGCNESQPA ALFPQSS

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MSGSSSTTTE AWVLDLLRGF RYHPPEEEMV NLLKKQVEGQ GSQAMPEIED KPWDLPDNES  60
IQLFLRFSER MMQGKASQAR HIIPEIDFYK YEPWELAGLM LPDSPYQTRM WLCFSRPDHK  120
YANSPRCNRL TEKGFWKITG KPREIKSRQL SKSVTCKKRT LTFHLGRPSK SSKTGWVKQE  180
YSLTSTVPGS NLSGLVLLRM KNKSADYESD NKQQQDVSIY DESADPAIGG DMASNSQDDQ  240
AAANHMILEA EEHLLGSGNH NDGEPGGFDI IQELCAQLGL DSPSPPPEQP RSHQLPQLGN  300
VPGTGDYLAS NSDNEAAAIH HLTTDEEELL AYKELERVLL GSGNPDDGEP GSCVSSDKHQ  360
ELCAQPGEDL DSPVPPPGRP ELGNAPDVYT DKCSIRSSPI RDNDSSLANK NNIPTNHDSK  420
PVSNTASNFE NQTTCERSSE VYCQSEENLQ LFYRSLELED YTFSSPISYL DLGDILHTNN  480
FIGCNESQPA ALFPQSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	2e-23	NAC family protein