PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g417780.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 416aa MW: 47077.4 Da PI: 4.6809

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g417780.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	88.6	1.2e-27	60	180	14	128
NAM 14 lvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelv 100 l ++Lk+ ++gk ++ ++i+e+d++k+eP+dL + + + w+ Fs+ + k+ ++ r nratk+g+Wk tgk +e++s+ +++++ Pd.00g417780.m01 60 LFLRFLKQMMQGKASQACHIIPEIDVCKYEPSDLAEllfpDSPYQPRMWFSFSRPHYKSINSLRYNRATKKGFWKITGKPREIKSQqlSKSVT 152 66789*******999999**********85455533447789*********************************97666667 PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 k+tL+f++gr +k++ktdWvm+ey l Pd.00g417780.m01 153 CKKRTLTFHEGRVSKSTKTDWVMQEYYL 180 7789********************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MRSTTTEEWL LPLLRGFRFH PPEEEMVNLL RKKMEGQGSQ TMPEIDYKPW NLSDNESISL 60 FLRFLKQMMQ GKASQACHII PEIDVCKYEP SDLAELLFPD SPYQPRMWFS FSRPHYKSIN 120 SLRYNRATKK GFWKITGKPR EIKSQQLSKS VTCKKRTLTF HEGRVSKSTK TDWVMQEYYL 180 TQTEPGSIPN QLSDFVLCRM KNKSAHYESD NKKLKDASIC DESADPDISG YMASNSEDDQ 240 APENNMIPEA DRHLADKELE HDLPGSGNHD AGEPGGCVSA DCDDMVQELS AQAGEYLDLP 300 FPPPEPGNAS VPSPIGNNDY SLPNKNNVTT NYDSKPVSNT ASNFKNQTKD EGTSEVYSQP 360 EEDLESFLQL KLDDYTWLSR ILQPEQGNLL QANNSIGCNE LQSPYPETAA LFPQSS

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MRSTTTEEWL LPLLRGFRFH PPEEEMVNLL RKKMEGQGSQ TMPEIDYKPW NLSDNESISL  60
FLRFLKQMMQ GKASQACHII PEIDVCKYEP SDLAELLFPD SPYQPRMWFS FSRPHYKSIN  120
SLRYNRATKK GFWKITGKPR EIKSQQLSKS VTCKKRTLTF HEGRVSKSTK TDWVMQEYYL  180
TQTEPGSIPN QLSDFVLCRM KNKSAHYESD NKKLKDASIC DESADPDISG YMASNSEDDQ  240
APENNMIPEA DRHLADKELE HDLPGSGNHD AGEPGGCVSA DCDDMVQELS AQAGEYLDLP  300
FPPPEPGNAS VPSPIGNNDY SLPNKNNVTT NYDSKPVSNT ASNFKNQTKD EGTSEVYSQP  360
EEDLESFLQL KLDDYTWLSR ILQPEQGNLL QANNSIGCNE LQSPYPETAA LFPQSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	2e-25	NAC family protein