PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g419020.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 241aa    MW: 26747.7 Da    PI: 5.8267
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g419020.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.90.00067831123
                      EEETTTTEEESSHHHHHHHHHH.T CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHirt.H 23
                      ++C+ C+++F ++  ++ H ++ H
  Pd.00g419020.m01  8 FPCNLCDRTFHTPGRFQDHCNRiH 31
                      89*******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MAREEELFPC NLCDRTFHTP GRFQDHCNRI HGMKKKTTVC STCKAHFLTD VDYANHLLSN  60
SKVDGCSPPN PQPMRCLGKP GGDGASFLEM GGTRVEVMWP KGDGRNEEHL MDPDIEGSHR  120
SSSFASADSL VDIATFQHHS RGGQKMDGGY DRAKEEEGGR RRNCAVRSRP YPSVIVFEVW  180
KVVERMSSRS DLSNSQETSS NGSAFRVDRE DEEVVEQMFE AADQIGEDMP VGLGDRGRGC  240
G