PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g419150.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 1722aa MW: 187780 Da PI: 6.5117

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g419150.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.3	2.4e-10	804	847	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++WT+eE el+++ + G++ +++Ia+ + ++t +c+++++k+ Pd.00g419150.m01 804 NPWTPEEKELFIEKLTTCGKD-FRKIASFLD-HKTTADCVEFYYKH 847 69***************99.*****.**********97 PP
2	Myb_DNA-binding	26	2.2e-08	1022	1062	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT E +++av +G++ ++ I+r++ +R+ qck ++ Pd.00g419150.m01 1022 DWTDAEKSSFIQAVSSYGKD-FAMISRCVR-TRSQHQCKVFFS 1062 6***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1722 aa Download sequence
MPPEPLPWDR KDFFKERKHE RSESLGSVAR WRDSPPHAPR DFNRWPSADF RRPPGHGKQG 60 GWHLFSEDSG HGYASSRSGD KMLEDESCRP SFSRGDGRYG RNSRDNRGSY SQRECKGHSW 120 ETSSGSPNTP GRPNDVINEQ RTQDDMLTYS SHPHSDFGST WDQIQLKDQL DRMGGSTGLG 180 AGQKCERENS LGSIDWKPLK WTRSGSMSSR GSGFSHSSSS KSIGAIDFNE VKVESQLKNA 240 TPMQSPSGEA TTCVTSAAPS EETTSRKKPR LGWGEGLAKY EKKKVEVPDG SMNKDGAVCS 300 VGNMEPVHSL SSNLADKSPR VTVFSDCASP ATPSSVACSS SPGVEEKSFG KTANVDNNNR 360 NFCGSPGPMF QSHHEGFTFN LEKLDCNSIA NLGSSLRELL QSDDPSSVDS GIVRPTAMNK 420 LLIWKGEISK VLEVTESEID SLENELKVLN SDSGGSCPRP ATSSSLPVED NDKSFKEQVT 480 VTNLITRPAP LQIHSSGDTD AEKMCLGNGD QVEFCGIVKD EDIDSPGTAT SKFVEPLPLV 540 KVVSSSDVMS HNDCSGDLDP IETTKGEAKC LVPGKYEEKT DLSASGNSSM LLGSEIVAPV 600 SGGSGLCFSV VDTICDSICS SNKESANRSF DVFNKLLPRE HYKVDISGVS ISSSGKNDSL 660 IKEKFAMRKR RLRFMERVLT LKYKAFQHLW KEDLRLLSIR KYRPKSHKKF ELSLRATNNG 720 YQKHRSSIRS RFSTPGNLSL VPTTEIINFT NKLLSDSQVK RYRNSLKMPA LILDKKEKMV 780 TRFISSNGLV EDPCVVEKER ALMNPWTPEE KELFIEKLTT CGKDFRKIAS FLDHKTTADC 840 VEFYYKHHKS VCFEKTKKAD MTKQGKSSAK TYLISNGKKW NREMNAASLD ILGAASAIAA 900 HADGSTRSRQ AYSGRLFLGG YRNTNPSRGD DTTVERSCSF DAIGNERETV AADVLAGICG 960 SLSSEAVSSC ITSSIDPGEG YREWKCQKVD SLARRPLTPD VMQNVDDETC SEESCGEMDP 1020 SDWTDAEKSS FIQAVSSYGK DFAMISRCVR TRSQHQCKVF FSKARKCLGL DLVHPVAGNG 1080 TSVGDDVNGG GSDTEDACVL ETGSGISSDK SGCRMNEDMP LSVINMDDES DPAETMNLQT 1140 GPLRSEENNV MGQLDHKGVQ TLKSLASDAL EAEDRPNLVL DDADCVRDAQ KSRVFSADAL 1200 KDDVAEEGIL IAESEPVGGR INFDPTNPGM DGEKLMGELS SDGNTDTSRC SLPGSVHDSN 1260 SSGNASALAG GGSCSGFSLN PECLHQVSVG LNSMQKPSVI SMPHENRHAP ADSVSQDSAK 1320 IECEKAFNQD RLSSTLDLQE GREPKSVGID ECHQHLPGLP IYTNVESSQV LKGYPLQMAT 1380 KKDTNGDVMS GNLSEVQNFS KPDRKINGHY MTKDGFLQFG NCKPQCSEVD FPLAPQKVEQ 1440 PVGPPKAHSW SSSDSDKPSR NGDVKLFGKI LSNPSSLSKS SSNIHENEEK GAHNHKLSNT 1500 SSNLKFTGHH NADGNSSLLK FDCSSYLGIE KVPRRSYGFW EGNKVHSGYP SFSDSAILLA 1560 KYPAAFGNFP TTSSKMEQQP LQAVVKNNDR NINGVSVFPS REISGSNGVV DYPVFSRSRD 1620 GAKVPPFTVD VKQQQQRQDV FDMPRRNGFD TISSLQQQGR GIVGMNVVGR GGILVGGPCT 1680 GVSDPVAAIR MHYAKTEQYG GQPGSMIREE ESWRGGKGDV GR

Sequence ? help Back to Top

Protein Sequence Length: 1722 aa Download sequence

MPPEPLPWDR KDFFKERKHE RSESLGSVAR WRDSPPHAPR DFNRWPSADF RRPPGHGKQG  60
GWHLFSEDSG HGYASSRSGD KMLEDESCRP SFSRGDGRYG RNSRDNRGSY SQRECKGHSW  120
ETSSGSPNTP GRPNDVINEQ RTQDDMLTYS SHPHSDFGST WDQIQLKDQL DRMGGSTGLG  180
AGQKCERENS LGSIDWKPLK WTRSGSMSSR GSGFSHSSSS KSIGAIDFNE VKVESQLKNA  240
TPMQSPSGEA TTCVTSAAPS EETTSRKKPR LGWGEGLAKY EKKKVEVPDG SMNKDGAVCS  300
VGNMEPVHSL SSNLADKSPR VTVFSDCASP ATPSSVACSS SPGVEEKSFG KTANVDNNNR  360
NFCGSPGPMF QSHHEGFTFN LEKLDCNSIA NLGSSLRELL QSDDPSSVDS GIVRPTAMNK  420
LLIWKGEISK VLEVTESEID SLENELKVLN SDSGGSCPRP ATSSSLPVED NDKSFKEQVT  480
VTNLITRPAP LQIHSSGDTD AEKMCLGNGD QVEFCGIVKD EDIDSPGTAT SKFVEPLPLV  540
KVVSSSDVMS HNDCSGDLDP IETTKGEAKC LVPGKYEEKT DLSASGNSSM LLGSEIVAPV  600
SGGSGLCFSV VDTICDSICS SNKESANRSF DVFNKLLPRE HYKVDISGVS ISSSGKNDSL  660
IKEKFAMRKR RLRFMERVLT LKYKAFQHLW KEDLRLLSIR KYRPKSHKKF ELSLRATNNG  720
YQKHRSSIRS RFSTPGNLSL VPTTEIINFT NKLLSDSQVK RYRNSLKMPA LILDKKEKMV  780
TRFISSNGLV EDPCVVEKER ALMNPWTPEE KELFIEKLTT CGKDFRKIAS FLDHKTTADC  840
VEFYYKHHKS VCFEKTKKAD MTKQGKSSAK TYLISNGKKW NREMNAASLD ILGAASAIAA  900
HADGSTRSRQ AYSGRLFLGG YRNTNPSRGD DTTVERSCSF DAIGNERETV AADVLAGICG  960
SLSSEAVSSC ITSSIDPGEG YREWKCQKVD SLARRPLTPD VMQNVDDETC SEESCGEMDP  1020
SDWTDAEKSS FIQAVSSYGK DFAMISRCVR TRSQHQCKVF FSKARKCLGL DLVHPVAGNG  1080
TSVGDDVNGG GSDTEDACVL ETGSGISSDK SGCRMNEDMP LSVINMDDES DPAETMNLQT  1140
GPLRSEENNV MGQLDHKGVQ TLKSLASDAL EAEDRPNLVL DDADCVRDAQ KSRVFSADAL  1200
KDDVAEEGIL IAESEPVGGR INFDPTNPGM DGEKLMGELS SDGNTDTSRC SLPGSVHDSN  1260
SSGNASALAG GGSCSGFSLN PECLHQVSVG LNSMQKPSVI SMPHENRHAP ADSVSQDSAK  1320
IECEKAFNQD RLSSTLDLQE GREPKSVGID ECHQHLPGLP IYTNVESSQV LKGYPLQMAT  1380
KKDTNGDVMS GNLSEVQNFS KPDRKINGHY MTKDGFLQFG NCKPQCSEVD FPLAPQKVEQ  1440
PVGPPKAHSW SSSDSDKPSR NGDVKLFGKI LSNPSSLSKS SSNIHENEEK GAHNHKLSNT  1500
SSNLKFTGHH NADGNSSLLK FDCSSYLGIE KVPRRSYGFW EGNKVHSGYP SFSDSAILLA  1560
KYPAAFGNFP TTSSKMEQQP LQAVVKNNDR NINGVSVFPS REISGSNGVV DYPVFSRSRD  1620
GAKVPPFTVD VKQQQQRQDV FDMPRRNGFD TISSLQQQGR GIVGMNVVGR GGILVGGPCT  1680
GVSDPVAAIR MHYAKTEQYG GQPGSMIREE ESWRGGKGDV GR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	0.0	MYB family protein