PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g423050.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ZF-HD
Protein Properties Length: 251aa    MW: 27035.8 Da    PI: 6.4004
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g423050.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer102.23.4e-323286358
       ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                      ++rY+eClkNhA+++Ggha+DGCgEfmp+ g+egt +alkCaAC+CHRnFHR+e +
  Pd.00g423050.m01 32 AARYRECLKNHAVEIGGHALDGCGEFMPA-GAEGTLDALKCAACNCHRNFHRKEGD 86
                      579*************************9.999********************965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MDFEDQEEHD EEMEMAASYD SLGNSAGGVR GAARYRECLK NHAVEIGGHA LDGCGEFMPA  60
GAEGTLDALK CAACNCHRNF HRKEGDPSGL ALMTADPYGQ LVPLHGQHNH PQFSPYYRTP  120
AGYLHVAPHH RPLALPSTSG GGGTHSRGEE QEDDVSNPSG GGGGGGDLGM GGGLHGTASS  180
GKKRFRTKFT AEQKERMLTL AETLGWRIQK QDEPAIQQFC NETGVKRHVL KVWMHNNKHT  240
LGPSNDEPNP S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.12e-62ZF-HD family protein