PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g425360.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 142aa MW: 15918.2 Da PI: 4.4841

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g425360.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	38.4	2.2e-12	29	115	3	96
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 vlt+ + + +lv+p +f ++ +s t+ + +g+ We+ + ++sg+ l +Wk F+ +n+Lk+gD +vF+ ++ s+++lv++ Pd.00g425360.m01 29 VVLTKTNIELLYQLVVPGRFSATLP---SCS-IPTVLTFRGKNWEMIY--HGSSGHKRLD-NWKAFAIDNNLKVGDACVFEQVECSSTRLVFR 114 5555555566678999999986663...344.4477889*******..9999998888.******************654466666665 PP E CS B3 96 v 96 v Pd.00g425360.m01 115 V 115 4 PP

Sequence ? help Back to Top
Protein Sequence Length: 142 aa Download sequence
MGDLLTSNPV IELEGDEFWP LSGKPFFDVV LTKTNIELLY QLVVPGRFSA TLPSCSIPTV 60 LTFRGKNWEM IYHGSSGHKR LDNWKAFAID NNLKVGDACV FEQVECSSTR LVFRVQILRG 120 DIPSEFLDKL DGDNVDAPIV LE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	1e-06	B3 family protein