PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g427000.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family AP2
Protein Properties Length: 186aa    MW: 21962.2 Da    PI: 10.7443
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g427000.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP227.48.7e-0972114138
               AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgt 38 
                       s+y GV++++++gr++A+++d  ++  g  ++ ++++lg++  
  Pd.00g427000.m01  72 SQYIGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGSYED 114
                       789******************988886678446*******975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MDLPRLSMMV KLSSNRLSWR TLWRMLEDHV ENVGVKLVRQ AGAKTKKRGG GKLSQKQPVH  60
RKSIDTFGQR TSQYIGVTRH RWTGRYEAHL WDNSCKKEGQ TRKGRQVYLG SYEDDKCEQD  120
DLRWLQKIWK AAGMNLDNGK VEFVWSSKEI NARSHEYWPR VMDIARKYTV NRITRCGQIM  180
GRYEAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.15e-31AP2 family protein