PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g432730.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 260aa    MW: 28359.6 Da    PI: 9.1024
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g432730.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.7e-20107156255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                        y+G+r+++ +g+W+AeIrdp     +  r++lg++ taeeAa+a++ a+++++g
  Pd.00g432730.m01 107 VYRGIRQRP-WGKWAAEIRDPQ----KgVRVWLGTYNTAEEAARAYDDAARRIRG 156
                       69*******.**********94....35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MCGGAIISDF ISAKRGRTLT AEDLWAEFDT ISDLLGLDHS SSSNNNNKKD QFEHQQNNKR  60
VAQKPKIPLS KGAGTSEKPK KTSPDAGAQK EEVGKASDKN KRVRKNVYRG IRQRPWGKWA  120
AEIRDPQKGV RVWLGTYNTA EEAARAYDDA ARRIRGGKAK LNFPELPPSS VPAPATPPLK  180
KRCVVGPAES TQSSLESSGN YCNYDPFEGG EIYGKKEVGS EHELKEQISS LELFLGLDEE  240
GPSEVNGRGG AVLKEQSCSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.11e-40ERF family protein