PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g433440.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 434aa MW: 47958.1 Da PI: 8.5397

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g433440.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.7	5.9e-21	53	146	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHel 89 +fY+++Ak++GFs+r+++++ + + +t+r+f+C + g+++ + +++ k +r+r+++r+gC+a +++ k+ +w+vt +++ HnHel Pd.00g433440.m01 53 EFYCSFAKQCGFSIRRHRTRGKdGVGRGVTRRDFTCHRGGYPQMKPSEDGKMQRNRKSSRCGCQAYMRIVKRAdfdVPEWRVTGFSNIHNHEL 145 6*************9998874556679***************9***************98887676789***********9 PP FAR1 90 a 90 Pd.00g433440.m01 146 L 146 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MSEGTSLGME DLSQDDIGTI EETAEDTILS RQTSVNLVPF VGQRFVSQEA AYEFYCSFAK 60 QCGFSIRRHR TRGKDGVGRG VTRRDFTCHR GGYPQMKPSE DGKMQRNRKS SRCGCQAYMR 120 IVKRADFDVP EWRVTGFSNI HNHELLKSNE VRLLPAYCSI STDDKTVFDS KMAKRMAVTH 180 ADLAPSRPGT GFGSKTGAFL TVLTILCGLF CFILCLIAEV TRSKVTWQIS NDEGDEGGKY 240 QCVYSGSGKS PLLCAASAFL GLAIIMVVEH AYMLIAISNS PPSVLVIWEP DHSGPAKSLK 300 WQAAFFFVAT WVSFAVGEIL LLIGLSVESG HLRKWSRPRP SCLVLREGVF SAAGVFALTT 360 VLLAAGLYLT ALRVQRISLH QETVRREIVE ASILYASPPT SPQISTIPRE NPIFRETHNI 420 DHQPLAALSK HLNL

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MSEGTSLGME DLSQDDIGTI EETAEDTILS RQTSVNLVPF VGQRFVSQEA AYEFYCSFAK  60
QCGFSIRRHR TRGKDGVGRG VTRRDFTCHR GGYPQMKPSE DGKMQRNRKS SRCGCQAYMR  120
IVKRADFDVP EWRVTGFSNI HNHELLKSNE VRLLPAYCSI STDDKTVFDS KMAKRMAVTH  180
ADLAPSRPGT GFGSKTGAFL TVLTILCGLF CFILCLIAEV TRSKVTWQIS NDEGDEGGKY  240
QCVYSGSGKS PLLCAASAFL GLAIIMVVEH AYMLIAISNS PPSVLVIWEP DHSGPAKSLK  300
WQAAFFFVAT WVSFAVGEIL LLIGLSVESG HLRKWSRPRP SCLVLREGVF SAAGVFALTT  360
VLLAAGLYLT ALRVQRISLH QETVRREIVE ASILYASPPT SPQISTIPRE NPIFRETHNI  420
DHQPLAALSK HLNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	7e-59	FAR1 family protein