PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g433500.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 144aa    MW: 16173.3 Da    PI: 7.722
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g433500.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.84.3e-062042123
                      EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                      ++C++Cg+ F ++  L  H++ H
  Pd.00g433500.m01 20 FECHYCGRKFENSQALGGHQNAH 42
                      89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MKLFGFSVTD HRDIVPMVKF ECHYCGRKFE NSQALGGHQN AHKRERQLER MAILEHVQQH  60
HHPPPPPHDQ YQRSATGVPI INDPMFVSSS RSTTVDGCAG YNTAGGAVVA PKDPHGLYLK  120
QIAKQEAVPK VDEENDVVDL RLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58070.17e-15C2H2 family protein