PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g434620.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 397aa    MW: 43183.3 Da    PI: 10.3024
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g434620.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.51.2e-05288310123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       y+C  CgksF + s L  H+++H
  Pd.00g434620.m01 288 YTCFECGKSFASGSALGGHMSSH 310
                       9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
MAFPSDIHNQ IGSINNTNGL IHTQMVYRSN YSTTIITTTY GLNGLPAVRS GFQNMHLLHS  60
PSSPAYWGGV VFPDRPVIPM IRSYQPRPPG LIMSNPHMTI RETHVPVQPT QTGPTFPNHT  120
LNLNFMRFQP PRVALAPHFP LNNISSPTTL SGFHGRTGVM RNQQSSSQTY HYGNISPNPI  180
MNAATRFRPP PSFSSNINIG RASIMSDNQI SLPTLVRATR FPTSSQLQFV PNHEPSTSSS  240
IIKEEPGDDH QQTHVAREST TTTVAAAASI AIATKSSQPP RPKPMGEYTC FECGKSFASG  300
SALGGHMSSH AKKRKLETAT SGKRFKPGDS FFDYVRHSPG FENGSSSRTA TNPPTMSING  360
PSGPSTNEGT KGIEEPSGKR EEKKSKDGDE EGPTSRQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1379386KREEKKSK
2379387KREEKKSKD