PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g436320.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 472aa    MW: 52054.4 Da    PI: 9.9481
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g436320.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3573.5e-181099398
                      EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                B3  3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
                       +l+ s++l+ ++l++p +f++++g +   s+  tl  ++g++W+v +  +k ++++++ +GW+eF +   +++g f++F+++g+s+f  +v++f
  Pd.00g436320.m01 10 HKLILSSTLQAKQLMIPENFVKKFGDD--LSTVATLSVPDGNVWRVGI--KKADNKFWFHDGWQEFIERYSIRVGYFLTFRYEGHSSF--TVHIF 98
                      5677789999999***********988..88999999***********..**********************************9999..88888 PP

                      - CS
                B3 98 r 98
                      +
  Pd.00g436320.m01 99 N 99
                      5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    
MKNMIRPCFH KLILSSTLQA KQLMIPENFV KKFGDDLSTV ATLSVPDGNV WRVGIKKADN  60
KFWFHDGWQE FIERYSIRVG YFLTFRYEGH SSFTVHIFNL TTAEINYQPN ALSSTGGSVY  120
RHQVFEEMED DDSVEILGSS PKSIVTDSLR DKLFGDCATQ LIPGKDYNPP ALQNLFNGSK  180
PKNCTNWPDA GNPHPSKGSG LQAGEDIRSM KKTMRKKRKL DPTVQESSSQ HEKEVEIRFR  240
FYESASARKR TVTAEERERA INAAKTFEPV NPFCRVVLRP SYLYRGCIMY LPSCFAEKNL  300
NGVSGFIKLQ SSDGRQWPVR CLYRGGRAKL SQGCTTTEKK KKKFSTMATA SATVSPAMFT  360
TTTVAKPRRA ANNVNYITGL NSFSGLKAHS SVASLGLPQG TEQSFAKIVS SLRAPSQGKG  420
RGGGGALSST CNAVGEIFKI AAIMNGLTLV GVAVGFVLLR IEASVEEAAE AE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-114B3 family protein