PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g438210.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 1723aa MW: 187604 Da PI: 6.3163

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g438210.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.5	8.4e-10	805	848	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++WT+eE el+++ + G++ +++Ia + ++t +c+++++k+ Pd.00g438210.m01 805 NPWTPEEKELFIEKLTTCGKD-FRKIAYFLD-HKTTADCVEFYYKH 848 69***************99.*****.**********97 PP
2	Myb_DNA-binding	26	2.2e-08	1024	1064	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT E +++av +G++ ++ I+r++ +R+ qck ++ Pd.00g438210.m01 1024 DWTDAEKSSFIQAVSSYGKD-FAMISRCVR-TRSQHQCKVFFS 1064 6***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1723 aa Download sequence
MPPEPLPWDR KDFFKERKHE RSESLGSVAR WRDSPHHAPR DFNRWPSADF RRPPGHGKQG 60 GWHLFSEDSG HGYASSRSGD KMLEDESCRP SFSRGDGRYG RNSRDNRGSY SQRECKGHSW 120 ETSSGSPNTP GRPNDVINEQ RTQDDMLTYS SHPHSDFGST WDQIQLKDQL DRMGGSTGLG 180 AGQKCERENS LGSIDWKPLK WTRSGSMSSR GSGFSHSSSS KSIGAIDFNE AKVESQPKNA 240 TPMQSPSGEA TTCVTSAAPS EETTSRKKPR LGWGEGLAKY EKKKVEVPDG SMNKDGAVCS 300 VGNMEPVHSL SSNLADKSPR VTVFSDCASP ATPSSVACSS SPGVEEKSFG KTANCDNNNR 360 NFCGSPGPMF QSPHEGFTFN LEKLDCNSIA NLGSSLRDLL QSDDPSSVDS GIVRPTAMNK 420 LLIWKGEISK VLEVTESEID SLENELKVLN SDSGGSSPRP ATSSSLPVED NDKSFKEQVT 480 VTNLITRPSP LQIHSSGDTD AENMCLGNGD QVEFCGIVKD EDIDSPGTAT SKFVEPLPLV 540 KVVSSSDLMS HNDCSGDLDP IETTKGEAKC LVPGKYEEKT DLSACGNSSM LLGSEIVAPV 600 SGGSGLCFSV VDTICDSICS SNKESANRSF DVFNKLLPRE HYKVDISGVS ISSSGKNDSL 660 IKEKFAMRKR RLRFMERVLT LKYKAFQHLW KEDLRLLSIR KYRPKSHKKF ELSLRATNNG 720 YQKHRSSIRS RFSTPAGNLS LVPTTEIINF TNKLLSDSQV KLCRNSLKMP ALILDKKEKM 780 VTRFISSNGL VEDPCVVEKE RALMNPWTPE EKELFIEKLT TCGKDFRKIA YFLDHKTTAD 840 CVEFYYKHHK SVCFEKTKKK ADMTKQGKSS AKTYLISNGK KWNREMNAAS LDILGAASAI 900 AAHADGSTRS RQAYSERLFL GGYGNANPSQ GDDTTVERSC SFDAIGNERE TVAADVLAGI 960 CGSLSSEAVS SCITSSIDPG EGYREWKCQK VDSLARRPLM PDVMQNVDDE TCSEESCGEM 1020 DPSDWTDAEK SSFIQAVSSY GKDFAMISRC VRTRSQHQCK VFFSKARKCL GLDLVHPVAG 1080 NGTSVGDDVN GGGSDTEDAC VLETGSGISS DKSGCRMNED MPLSVINMDD ESDPAETMNL 1140 QTGPLRSEEN NVMGQLDHEG GQTLKSLVSD ALEVEDRPNL VLDNADCVRD AQKSRVFSAD 1200 ALKVDVAEEG ILIAESEPVG GGINFDPTNP GMDGEKLMGE LSSDGNTDTS RCSLPGSVHD 1260 SNSSGNASAL AGGGSCSGFS LNPEFLHQVS VGLNSMQKPS VISMPHETRH APADSVSQDS 1320 AKIECEKAFN QDRLSSTLDL QEGREPKSVG IDECHQHLPG LPIYTNVESS QVLKGYPLQM 1380 ATKKDTNGDV TSGNLSEVQN FSKPDRKING HYMTKDGFLQ FGNCKPQCSE VDFPLAPQKV 1440 EQPVGPPKAH SWSSSDSDKP SRNGDVKLFG KILSNPSSLS KSSSNIHENE EKGAHNHKLS 1500 STSSNLKFTG HHNADGNSSL LKFDCSSYLG IEKVPRRSYG FWEGNKVHSG YPSFSDSAIL 1560 LAKYPAAFGN FPTTSSKMEQ QPLQAVVKNN DRNINGVSVF PSREISGSNG VVDYPVFSRS 1620 RDGAKVPPFT VDVKQQQRQD VFDMPRRNGF DTISSLQQQG RGIVGMNVVG RGGILVGGPC 1680 TGVSDPVAAI RMHYAKTEQY GGQPGSMIRE EESWRGGKGD VGR

Sequence ? help Back to Top

Protein Sequence Length: 1723 aa Download sequence

MPPEPLPWDR KDFFKERKHE RSESLGSVAR WRDSPHHAPR DFNRWPSADF RRPPGHGKQG  60
GWHLFSEDSG HGYASSRSGD KMLEDESCRP SFSRGDGRYG RNSRDNRGSY SQRECKGHSW  120
ETSSGSPNTP GRPNDVINEQ RTQDDMLTYS SHPHSDFGST WDQIQLKDQL DRMGGSTGLG  180
AGQKCERENS LGSIDWKPLK WTRSGSMSSR GSGFSHSSSS KSIGAIDFNE AKVESQPKNA  240
TPMQSPSGEA TTCVTSAAPS EETTSRKKPR LGWGEGLAKY EKKKVEVPDG SMNKDGAVCS  300
VGNMEPVHSL SSNLADKSPR VTVFSDCASP ATPSSVACSS SPGVEEKSFG KTANCDNNNR  360
NFCGSPGPMF QSPHEGFTFN LEKLDCNSIA NLGSSLRDLL QSDDPSSVDS GIVRPTAMNK  420
LLIWKGEISK VLEVTESEID SLENELKVLN SDSGGSSPRP ATSSSLPVED NDKSFKEQVT  480
VTNLITRPSP LQIHSSGDTD AENMCLGNGD QVEFCGIVKD EDIDSPGTAT SKFVEPLPLV  540
KVVSSSDLMS HNDCSGDLDP IETTKGEAKC LVPGKYEEKT DLSACGNSSM LLGSEIVAPV  600
SGGSGLCFSV VDTICDSICS SNKESANRSF DVFNKLLPRE HYKVDISGVS ISSSGKNDSL  660
IKEKFAMRKR RLRFMERVLT LKYKAFQHLW KEDLRLLSIR KYRPKSHKKF ELSLRATNNG  720
YQKHRSSIRS RFSTPAGNLS LVPTTEIINF TNKLLSDSQV KLCRNSLKMP ALILDKKEKM  780
VTRFISSNGL VEDPCVVEKE RALMNPWTPE EKELFIEKLT TCGKDFRKIA YFLDHKTTAD  840
CVEFYYKHHK SVCFEKTKKK ADMTKQGKSS AKTYLISNGK KWNREMNAAS LDILGAASAI  900
AAHADGSTRS RQAYSERLFL GGYGNANPSQ GDDTTVERSC SFDAIGNERE TVAADVLAGI  960
CGSLSSEAVS SCITSSIDPG EGYREWKCQK VDSLARRPLM PDVMQNVDDE TCSEESCGEM  1020
DPSDWTDAEK SSFIQAVSSY GKDFAMISRC VRTRSQHQCK VFFSKARKCL GLDLVHPVAG  1080
NGTSVGDDVN GGGSDTEDAC VLETGSGISS DKSGCRMNED MPLSVINMDD ESDPAETMNL  1140
QTGPLRSEEN NVMGQLDHEG GQTLKSLVSD ALEVEDRPNL VLDNADCVRD AQKSRVFSAD  1200
ALKVDVAEEG ILIAESEPVG GGINFDPTNP GMDGEKLMGE LSSDGNTDTS RCSLPGSVHD  1260
SNSSGNASAL AGGGSCSGFS LNPEFLHQVS VGLNSMQKPS VISMPHETRH APADSVSQDS  1320
AKIECEKAFN QDRLSSTLDL QEGREPKSVG IDECHQHLPG LPIYTNVESS QVLKGYPLQM  1380
ATKKDTNGDV TSGNLSEVQN FSKPDRKING HYMTKDGFLQ FGNCKPQCSE VDFPLAPQKV  1440
EQPVGPPKAH SWSSSDSDKP SRNGDVKLFG KILSNPSSLS KSSSNIHENE EKGAHNHKLS  1500
STSSNLKFTG HHNADGNSSL LKFDCSSYLG IEKVPRRSYG FWEGNKVHSG YPSFSDSAIL  1560
LAKYPAAFGN FPTTSSKMEQ QPLQAVVKNN DRNINGVSVF PSREISGSNG VVDYPVFSRS  1620
RDGAKVPPFT VDVKQQQRQD VFDMPRRNGF DTISSLQQQG RGIVGMNVVG RGGILVGGPC  1680
TGVSDPVAAI RMHYAKTEQY GGQPGSMIRE EESWRGGKGD VGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	0.0	MYB family protein