PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g440100.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 568aa    MW: 62961.4 Da    PI: 6.5857
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g440100.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.71.2e-14311221100
                       EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                       ffkv+       s++l lp kfa +   ++   +++ +led+ g +Wev +  ++  g+  l++GW+ F  +++Lk g+f++F ++++s f  
  Pd.00g440100.m01  31 FFKVM--IGDRFSKLLFLPPKFAPTVsALV---NQKAVLEDSLGLQWEVII--SRINGSLSLKQGWNAFSLDHDLKIGEFLIFNYISSSHF-- 114
                       77777..444555679*******9996555...347***************..9999999**************************98999.. PP

                       EEEEE-SS CS
                B3  93 vvkvfrks 100
                        vk+++ks
  Pd.00g440100.m01 115 IVKIYDKS 122
                       ***99985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 568 aa     Download sequence    
MDGKVACVEC TQKCLLDHGN KKKASPDVAS FFKVMIGDRF SKLLFLPPKF APTVSALVNQ  60
KAVLEDSLGL QWEVIISRIN GSLSLKQGWN AFSLDHDLKI GEFLIFNYIS SSHFIVKIYD  120
KSGCEKLNFP EAINQKKRTR DNRKYAFKAG PSHTIDRSSM NKWDSRTSVL YGSDADTGHH  180
LHERNDTGKA LIVTENASTR DNSNERSKLK LKEAYIEEMI CMFDRDVGDK QEEDRTYIFD  240
LSDFEMLKKN SGTGGSNEVT AMDETCTDHD DSLLGLISEA GSVDKSPVAK EAVTAEIPSD  300
ASKFDGSRIN NSSETKAQNT ASPSHEGLCI CKTSGHLFPK AALKPEENEN ISNISKRAIN  360
KCPTAGRSES LSGNEVVIFG KEHDLINDSC QSASKKISEI SEPFDKMMKA IKIESVELTS  420
DPSSQKIIPQ INGESVKVVN PVGSKISNMI RTENDSAVPV VKSEPVDPVI TLPISSSFSC  480
QELPMSLPIR MTYRGRPKTD RRVVYLRDSV MRLWPVLYIE RNYFKTLASG WEAFSKANNI  540
QPGDECVIGV ENGVEGICTV QIISKREI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18960.11e-11B3 family protein