PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g441650.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family LFY
Protein Properties Length: 410aa    MW: 45648.1 Da    PI: 7.6219
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g441650.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY628.98.6e-19213961386
           FLO_LFY   1 mdpeafsaslfkwdpraaaaapparlleeaavseapleaaaaaaarklr...eleelfkayGvryltvakiaelGftvstLvdmkdeelddlm 90 
                       mdp+afsaslfkwd r ++++p++  le a++++a+++aaa aa r+ r   +le+lf+ayGvry+t+akiaelGftv+tL+dm+d eldd+m
  Pd.00g441650.m01   1 MDPDAFSASLFKWDLRGMVVPPSRAQLEAAVTPQAAAAAAAYAAVRSPRelgGLEDLFQAYGVRYYTAAKIAELGFTVNTLLDMRDGELDDMM 93 
                       9**************99887766544444444444433333333333334559**************************************** PP

           FLO_LFY  91 kslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeet..aldalsqeglseepvqeekeaagsggeglgeaelvaaeekks 181
                       +sls+ifr+dllvGeryGikaavraerrrl++e+  ++rr+++s d++t  aldalsqeglseepvq+eke++gsgg+ + e+e++a e++k+
  Pd.00g441650.m01  94 SSLSQIFRWDLLVGERYGIKAAVRAERRRLDDED--SRRRHTVSGDTTTtnALDALSQEGLSEEPVQQEKEMVGSGGGAAWEVEAAAGEKRKK 184
                       ********************************88..8888899888766569***********************999954444444443222 PP

           FLO_LFY 182 eeekkkaskkkqkrkkkkelkse.........ededeeeeededeegsgedge...erqrehPfivtepgevargkknGLDYLfdLyeqCref 262
                       +++++k      + ++ + +            ++ed++  +d +++g+g++g    er+rehPfivtepgevargkknGLDYLf+LyeqCr+f
  Pd.00g441650.m01 185 QRRTRK-----GQYRNFNGIGGGhnndhnegvDNEDDNGIDDMNRHGNGAGGGlltERRREHPFIVTEPGEVARGKKNGLDYLFHLYEQCRDF 272
                       222222.....222222222111333344454555555666666666777765677************************************* PP

           FLO_LFY 263 LlqvqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdi 355
                       L+qvq+iakerGekcPtkvtnqvfr+akkagasyinkPkmrhYvhCYalhcLdeeasnalrr fkergenvGawr+acykplvaiaa qgw+i
  Pd.00g441650.m01 273 LIQVQNIAKERGEKCPTKVTNQVFRFAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRVFKERGENVGAWREACYKPLVAIAAGQGWEI 365
                       ********************************************************************************************* PP

           FLO_LFY 356 davfnahprLsiWYvPtkLrqLChlerskas 386
                       da+fn+hprLsiWYvPtkLr+LCh+er++a+
  Pd.00g441650.m01 366 DAIFNSHPRLSIWYVPTKLRRLCHTERNNAT 396
                       ****************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    
MDPDAFSASL FKWDLRGMVV PPSRAQLEAA VTPQAAAAAA AYAAVRSPRE LGGLEDLFQA  60
YGVRYYTAAK IAELGFTVNT LLDMRDGELD DMMSSLSQIF RWDLLVGERY GIKAAVRAER  120
RRLDDEDSRR RHTVSGDTTT TNALDALSQE GLSEEPVQQE KEMVGSGGGA AWEVEAAAGE  180
KRKKQRRTRK GQYRNFNGIG GGHNNDHNEG VDNEDDNGID DMNRHGNGAG GGLLTERRRE  240
HPFIVTEPGE VARGKKNGLD YLFHLYEQCR DFLIQVQNIA KERGEKCPTK VTNQVFRFAK  300
KAGASYINKP KMRHYVHCYA LHCLDEEASN ALRRVFKERG ENVGAWREAC YKPLVAIAAG  360
QGWEIDAIFN SHPRLSIWYV PTKLRRLCHT ERNNATASSS ASGGGDHLPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-108LFY family protein