PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g442650.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 131aa    MW: 15206.3 Da    PI: 7.0891
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g442650.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR145.52.4e-1442119285
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 
                       fY++YA+ vGF +r+ +s+ks+r+g+i++r + C     + ++  +      ++ e+r  C+a++ +++ek g w+++k+ ++H
  Pd.00g442650.m01  42 FYDDYASCVGFLTRVLSSRKSERDGSIISRGLGCRWVSDNGRKVMQ------KECEQREFCTAMVLLRQEKPGSWVIKKFLKDH 119
                       9*********************************888777776655......88999**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    
MDDQNGTIYT SEGGEINIIE MSTNQEPYEG MLFESEDAVR VFYDDYASCV GFLTRVLSSR  60
KSERDGSIIS RGLGCRWVSD NGRKVMQKEC EQREFCTAMV LLRQEKPGSW VIKKFLKDHK  120
LKEIRYITCR K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.15e-26FAR1 family protein