PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g443410.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 142aa    MW: 15990.3 Da    PI: 4.7252
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g443410.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3391.5e-1227116195
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE.E-SS.SEE. CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk.ldgr.sefe 91 
                       f+ vlt+ +  ++ +lv+p +f ++      +s   t+ + +g+ We+ +   ++s++  l  +Wk F+ +n+Lk+gD +vF+ l+ + ++  
  Pd.00g443410.m01  27 FDVVLTKTNIERLYQLVVPGRFSATLP---SCS-IPTVLTFRGKNWEMIY--HGSSSHKRLD-NWKAFAIDNNLKVGDACVFEqLVCSsTRLV 112
                       677888888889999*******97773...344.4577889*********..8888877787.********************6555434444 PP

                       .EEE CS
                B3  92 lvvk 95 
                       ++v+
  Pd.00g443410.m01 113 FRVQ 116
                       4455 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MGDQLTSNPV IELEGDEFWP LSGKPFFDVV LTKTNIERLY QLVVPGRFSA TLPSCSIPTV  60
LTFRGKNWEM IYHGSSSHKR LDNWKAFAID NNLKVGDACV FEQLVCSSTR LVFRVQILRG  120
DIPSEFLDKL DGDNVDAPIV LE